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Translating and Formalizing the MIRAGE Guidelines to a Prototype MIRAGE Ontology and DCAT3 Extension Vocabulary for Glycomics Data Management

A paper on formalizing MIRAGE guidelines into a prototype ontology and DCAT3 extension vocabulary for glycomics data management.

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Translating and Formalizing the MIRAGE Guidelines to a Prototype MIRAGE Ontology and DCAT3 Extension Vocabulary for Glycomics Data Management

By Achille Zappa
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The authors present a comprehensive semantic formalization of MIRAGE guidelines using an integrated RDF ontology framework. The framework models glycan structures, biological specimens, analytical instruments, and experimental processes with formal OWL semantics and SHACL validation constraints.

It enables automated quality assessment, federated data querying, and enhanced reproducibility in glycomics research.

Abstract

The authors present a comprehensive semantic formalization of MIRAGE guidelines using an integrated RDF ontology framework. The framework models glycan structures, biological specimens, analytical instruments, and experimental processes with formal OWL semantics and SHACL validation constraints. It enables automated quality assessment, federated data querying, and enhanced reproducibility in glycomics research.

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mirage guidelinesglycomics data managementrdf ontology frameworkowl semanticsshacl validation constraintsOntology & TaxonomySemantic InteroperabilitySchemas & Shapes
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